HUMAN PROTEINPEDIA 
 

Public data contributed to Human Proteinpedia can be downloaded here


  Human Proteinpedia
Accession Number
Description Journal Name Annotation Category Experimental Platform Download Data Contributing Group
(Principal Investigator)
1. HuPA_00001 Brain proteome analysis  Tissue expression: Brain
 Mass spectrometry Download
Dr. Michael Dunn
2. HuPA_00002 Plasma proteome analysis  Unpublished Tissue expression: Blood plasma
 Mass spectrometry Download
Dr. William Hancock
3. HuPA_00003 B Cell proteome analysis  Tissue expression: B Cell
 Mass spectrometry Download
Dr. David Muddiman
4. HuPA_00004 Saliva proteome analysis  Unpublished Tissue expression: Saliva
 Mass spectrometry Download
Dr. Keiryn Bennett
5. HuPA_00005 Plasma proteome analysis  Unpublished Tissue expression: Blood plasma
 Mass spectrometry Download
Dr. William Hancock
6. HuPA_00006 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Guy Poirier
7. HuPA_00007 Platelet subproteome analysis  Unpublished Tissue expression: Platelet
Subcellular localization
 Mass spectrometry Download
Dr. Gerard Cagney
8. HuPA_00008 Serum proteome analysis  Tissue expression: Serum
 Mass spectrometry Download
Dr. Richard Smith
9. HuPA_00009 Serum proteome analysis  Tissue expression: Serum
 Mass spectrometry Download
Dr. Jenny Van Eyk
10. HuPA_00010 PARK7 brain expression analysis  Unpublished Tissue expression: Brain
 Western blotting Download
Dr. Ravi Sirdeshmukh
11. HuPA_00012 Her2/neu tyrosine phosphoproteome anlaysis  Cell line expression: NIH3T3
Post-translational modifications
 Mass spectrometry Download
Dr. Philip Cole
12. HuPA_00013 Organellar proteomic analysis  Subcellular localization
 Fusion proteins for
subcellular localization
Download
Dr. Ragna Rönnholm
13. HuPA_00015 HeLa phosphoproteome anlaysis  Cell line expression: HeLa
Post-translational modifications
 Mass spectrometry Download
Dr. Matthias Mann
14. HuPA_00016 TNF phosphoproteome anlaysis  Cell line expression: HeLa
Post-translational modifications
 Mass spectrometry Download
Dr. John Yates, III
15. HuPA_00017 Bile duct analysis  Unpublished Tissue expression: Bile duct
 Western blotting Download
Dr. Akhilesh Pandey
16. HuPA_00018 Hair shaft proteome analysis  Tissue expression: Hair
Post-translational modifications
 Mass spectrometry Download
Dr. Robert Rice
17. HuPA_00019 Sulfation analysis  Unpublished Cell line expression:
Post-translational modifications
 Mass spectrometry Download
Dr. Mark McComb
18. HuPA_00020 Hepatocellular carcinoma analysis  Unpublished Disease tissue expression
 Immunohistochemistry Download
Dr. Akhilesh Pandey
19. HuPA_00021 Urine phosphoproteome analysis  Unpublished Tissue expression: Urine
Post-translational modifications
 Mass spectrometry Download
Dr. Young-Ki Paik
20. HuPA_00022 Lung proteome analysis  Unpublished Tissue expression: Lung
 Mass spectrometry Download
Dr. Thomas Neubert
21. HuPA_00024 GFP fusion analysis  Subcellular localization
 Fusion proteins for
subcellular localization
Download
Dr. Osamu Ohara
22. HuPA_00026 B Cell proteome analysis  Tissue expression: B Cell
 Mass spectrometry Download
Dr. Mauno Vihinen
23. HuPA_00028 Histone modification analysis  Unpublished Cell line expression: 293 HEK
Post-translational modifications
 Mass spectrometry Download
Dr. Alma Burlingame
24. HuPA_00029 Casein kinase II experiments using peptide microarray  Unpublished Enzyme substrates
Post-translational modifications
 Protein/peptide microarray Download
Dr. Akhilesh Pandey
25. HuPA_00030 Histone modifications analysis  Cell line expression: SCLC OC-NYH
Post-translational modifications
 Mass spectrometry Download
Dr. Ole Jensen
26. HuPA_00031 Phosphoproteome analysis  Unpublished Tissue expression: Mesenchymal cell
Post-translational modifications
 Mass spectrometry Download
Dr. Blagoy Blagoev
27. HuPA_00032 Pancreatic cancer analysis  Unpublished Disease tissue expression
 Immunohistochemistry Download
Dr. Akhilesh Pandey
28. HuPA_00033 Brain proteome analysis  Unpublished Tissue expression: Brain
 Mass spectrometry Download
Dr. Brian Balgley
29. HuPA_00034 Acetylation analysis  Unpublished Cell line expression:
Post-translational modifications
 Mass spectrometry Download
Dr. Catherine Fenselau
30. HuPA_00035 Human Protein Atlas Project  Tissue expression:
 Immunohistochemistry Download
Dr. Mathias Uhlen
31. HuPA_00036 Ovary proteome analysis  Unpublished Tissue expression: Ovary
 Mass spectrometry Download
Dr. Brian Balgley
32. HuPA_00037 Adipose derived stem cell analysis  Tissue expression: Stem cell
 Mass spectrometry Download
Dr. Jeffrey Gimble
33. HuPA_00038 Bone marrow stromal cell proteome analysis  Tissue expression: Bone marrow
 Mass spectrometry Download
Dr. Beerelli Seshi
34. HuPA_00041 Saliva proteome analysis  Tissue expression: Saliva
 Mass spectrometry Download
Dr. Eric Dransfield
35. HuPA_00042 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Akhilesh Pandey
36. HuPA_00044 Liver normal and tumor tissue analysis  Unpublished Tissue expression: Liver
 Mass spectrometry Download
Dr. Akhilesh Pandey
37. HuPA_00045 Liver normal and tumor tissue analysis  Unpublished Tissue expression: Liver
 Mass spectrometry Download
Dr. Akhilesh Pandey
38. HuPA_00046 Organellar proteomic analysis  Subcellular localization
 Fusion proteins for
subcellular localization
Download
Dr. Ragna Rönnholm
39. HuPA_00047 Glycosylation analysis  Tissue expression: Saliva
 Mass spectrometry Download
Dr. Joseph Loo
40. HuPA_00048 Platelet acetylation analysis  Tissue expression: Platelet
Post-translational modifications
 Mass spectrometry Download
Dr. Kris Gevaert
41. HuPA_00050 Organellar proteomic analysis  Subcellular localization
 Fusion proteins for
subcellular localization
Download
Dr. Ragna Rönnholm
42. HuPA_00051 Acetylation analysis  Unpublished Cell line expression:
Post-translational modifications
 Mass spectrometry Download
Dr. Sumio Sugano
43. HuPA_00052 Enrichment and Identification of Cationic Urinary Proteins  Unpublished Tissue expression: Urine
 Mass spectrometry Download
Dr. Visith Thongboonkerd
44. HuPA_00053 Urinary proteome analysis  Unpublished Tissue expression: Urine
 Mass spectrometry Download
Dr. Visith Thongboonkerd
45. HuPA_00054 Brain proteome analysis  Unpublished Tissue expression: Brain
 Mass spectrometry Download
Dr. K.W. Michael Siu
46. HuPA_00056 Ubiquitination analysis  Cell line expression: H1299
Post-translational modifications
 Mass spectrometry Download
Dr. Daniel Figeys
47. HuPA_00058 Sperm proteome analysis  Tissue expression: Spermatozoa
 Mass spectrometry Download
Dr. Rafael Oliva
48. HuPA_00059 Pancreas tissue analysis  Unpublished Tissue expression: Pancreas
 Mass spectrometry Download
Dr. Akhilesh Pandey
49. HuPA_00060
to
HuPA_00134
HUPO Liver Proteome Project    Tissue expression: Liver
 Mass spectrometry Download
Dr. Fuchu He
50. HuPA_00135 Pancreatic juice analysis  Tissue expression: Pancreatic juice
 Mass spectrometry Download
Dr. Akhilesh Pandey
51. HuPA_00136 Pancreatic juice analysis  Tissue expression: Pancreatic juice
 Mass spectrometry Download
Dr. Akhilesh Pandey
52. HuPA_00137 Urine ultrafiltrate analysis  Unpublished Tissue expression: Urine
Post-translational modifications
 Mass spectrometry Download
Dr. Harald Mischak
53. HuPA_00138 Cerebrospinal fluid analysis  Tissue expression: Cerebrospinal fluid
 Mass spectrometry Download
Dr. Jean-Charles Sanchez
54. HuPA_00139
to
HuPA_00143
Immunohistochemical staining for NKX3.1  Tissue expression: Prostate
Prostate atrophy
Prostate prostatic intraepithelial neoplasia
Prostate carcinoma
Prostate benign prostatic hyperplasia
 Immunohistochemistry Download
Dr. Angelo DeMarzo
55. HuPA_00144 Large-scale mapping of protein-protein interactions by mass spectrometry  Protein-protein interaction
 Mass spectrometry Download
Dr. Daniel Figeys
56. HuPA_00145 LIFEdb - GFP fusion analysis  Subcellular localization
 Fusion proteins for
subcellular localization
Download
Dr. Stefan Wiemann
57. HuPA_00150 Jurkat cells analysis  Cell line expression: Jurkat
Post-translational modifications
 Mass spectrometry Download
Dr. Kris Gevaert
58. HuPA_00151 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Xose Bustelo
59. HuPA_00152 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Xose Bustelo
60. HuPA_00153 GST Pull down based
protein-protein interaction analysis 
Protein-protein interaction
 GST Pull down Download
Dr. Xose Bustelo
61. HuPA_00154 GST Pull down based
protein-protein interaction analysis 
Protein-protein interaction
 GST Pull down Download
Dr. Xose Bustelo
62. HuPA_00155 GST Pull down based
protein-protein interaction analysis 
Protein-protein interaction
 GST Pull down Download
Dr. Xose Bustelo
63. HuPA_00156 GST Pull down based
protein-protein interaction analysis 
Protein-protein interaction
 GST Pull down Download
Dr. Xose Bustelo
64. HuPA_00157
to
HuPA_00358
HUPO Liver Proteome Project    Tissue expression: Liver
 Mass spectrometry Download
Dr. Fuchu He
65. HuPA_00359 Tandem Affinity Purification based protein-protein interaction analysis  Protein-protein interaction
 Tandem Affinity Purification Download
Dr. Heiko Hermeking
66. HuPA_00360 Tandem Affinity Purification based protein-protein interaction analysis  Protein-protein interaction
 Tandem Affinity Purification Download
Dr. Heiko Hermeking
67. HuPA_00361 Ovarian tumor proteome analysis  Disease tissue expression
 Mass spectrometry Download
Dr. Peter James
68. HuPA_00363
to
HuPA_00376
HUPO Plasma Proteome Project  Tissue expression: Blood Plasma
 Mass spectrometry Download
HUPO Plasma
Proteome Consortium
69. HuPA_00377 Pancreatic cancer analysis  Unpublished Disease tissue expression
 Immunohistochemistry Download
Dr. Akhilesh Pandey
70. HuPA_00378 Liver cancer analysis  Unpublished Disease tissue expression
 Western blotting Download
Dr. Akhilesh Pandey
71. HuPA_00379 HeLa cell fractionization  Unpublished Cell line expression: HeLa
 Mass spectrometry Download
Dr. David Horn
72. HuPA_00380 Identification of NPM-ALK interacting proteins by tandem mass spectrometry  Cell line expression: Karpas 299
 Mass spectrometry Download
Dr. Kojo Elenitoba-Johnson
73. HuPA_00381 Identification of NPM-ALK interacting proteins by tandem mass spectrometry  Cell line expression: Karpas 299
 Mass spectrometry Download
Dr. Kojo Elenitoba-Johnson
74. HuPA_00382 Human erythroleukemia K562 analysis  Cell line expression: K562
 Mass spectrometry Download
Dr. Natalie Ahn
75. HuPA_00383 Human erythroleukemia K562 analysis  Cell line expression: K562
 Mass spectrometry Download
Dr. Natalie Ahn
76. HuPA_00384 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. M Angel Piris
77. HuPA_00388
to
HuPA_00399
293T phosphoproteome analysis  Cell line expression: 293T
Post-translational modifications
 Mass spectrometry Download
Dr. Akhilesh Pandey
78. HuPA_00400
to
HuPA_00580
Cellzome_Abl_inhibitors_NatureBiotechnology  Cell line expression: HeLa, Jurkat, K-562, Placenta, Ramos
 Mass spectrometry Download
Dr. Bernhard Kuster
79. HuPA_00595 Co-immunoprecipitation based
protein-protein interaction analysis 
Unpublished Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Paola Marignani
80. HuPA_00634 Co-immunoprecipitation based
protein-protein interaction analysis 
Unpublished Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Thomas george
81. HuPA_00635 Co-immunoprecipitation based
protein-protein interaction analysis 
Protein-protein interaction
 Co-immunoprecipitation based
protein-protein interaction
Download
Dr. Gyorgy Szabadkai
82. HuPA_00636 Liver cancer analysis  Unpublished Disease tissue expression
 Western blotting Download
Dr. Akhilesh Pandey
83. HuPA_00637   Unpublished Disease tissue expression
 Immunohistochemistry Download
Dr. Akhilesh Pandey


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